BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B11SP1|AL426167
(652 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig783 1268 0.0
>3x_Contig783
Length = 2733
Score = 1268 bits (634), Expect = 0.0
Identities = 643/652 (98%)
Strand = Plus / Minus
Query: 1 gatcttaggtaaaggtaagtttggtaaagtttattgcgttaaacatagggaaacggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2631 gatcttaggtaaaggtaagtttggtaaagtttattgcgttaaacatagggaaacggggct 2572
Query: 61 aatttgtgctttaaaagcgatggaaaagaaggaaattgttcaatatacaattcagaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2571 aatttgtgctttaaaagcgatggaaaagaaggaaattgttcaatatacaattcagaaaca 2512
Query: 121 gttcaggagggaggtagaaattcagggttcgttcaaacataaaamtctgacacagctata 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2511 gttcaggagggaggtagaaattcagggttcgttcaaacataaaaatctgacacagctata 2452
Query: 181 tggattcttttacgacgaaaaacgggtttatctacttatggratatgtctattacggaga 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2451 tggattcttttacgacgaaaaacgggtttatctacttatggaatatgtctattacggaga 2392
Query: 241 actatataamtttttgaagaataacgggcctttgaatgagacgctggcatcctattttgt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2391 actatataaatttttgaagaataacgggcctttgaatgagacgctggcatcctattttgt 2332
Query: 301 ttatcaaatggctaatgccttggattatatgcatagtaaaaacatattgcatagagatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2331 ttatcaaatggctaatgccttggattatatgcatagtaaaaacatattgcatagagatat 2272
Query: 361 aamaccggagaatatcttaattggtttcaacaacactatcaaactgacagatttcggttg 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2271 aaaaccggagaatatcttaattggtttcaacaacactatcaaactgacagatttcggttg 2212
Query: 421 grgtgtatathacgaggatggacaaaagaggaagactttatgcggaactatagattacct 480
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2211 gagtgtatataacgaggatggacaaaagaggaagactttatgcggaactatagattacct 2152
Query: 481 ttcaccagagctcattaaatctagagaatatmacaataaagtagatgtttgggccctagg 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2151 ttcaccagagctcattaaatctagagaatataacaataaagtagatgtttgggccctagg 2092
Query: 541 agttctaacttatgagctattagttggrtcgccaccttttgaggaggatacaaaggaaat 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2091 agttctaacttatgagctattagttggatcgccaccttttgaggaggatacaaaggaaat 2032
Query: 601 gacatatagaagavttttgaggtgcgatctcaagttcccactaaatgtttca 652
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 gacatatagaagaattttgaggtgcgatctcaagttcccactaaatgtttca 1980
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4223
Number of Sequences: 1807
Number of extensions: 4223
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 652
length of database: 10,358,551
effective HSP length: 16
effective length of query: 636
effective length of database: 10,329,639
effective search space: 6569650404
effective search space used: 6569650404
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)